HDXfit
The package HDXfit contains scripts for fitting the site exchange probabilities to mass envelopes of the peptides produced in a hydrogen/deuterium exchange experiment. The method was introduced in: Kan,Walters, Mayne, Englander, Proc. Nat. Acad. Sci. U.S.A. (2013) 110, 16438-16443, doi:10.1073/pnas.1315532110. HDXfit package is designed to perform the fitting in a more efficient and better controlled way. The underlying theory and the algorithms, as well as the results from simulations, are reported in the paper D. Babic, S, Kazazic, D. M. Smith, Resolution of protein H/D exchange by fitting amide exchange probabilities to the peptide isotopic envelopes, Rapid Commun. Mass Sp. accepted for publication (http://dx.doi.org/10.1002/rcm.8460).
引用格式
Darko Babic (2024). HDXfit (https://www.mathworks.com/matlabcentral/fileexchange/69415-hdxfit), MATLAB Central File Exchange. 检索来源 .
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版本 | 已发布 | 发行说明 | |
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1.0.2.1 | The reference where the method was published, is updated. |
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1.0.2 | README.txt was not recognized and displayed. It is now under the heading Examples, in the file hdxfit.html. The preview displays only the head; to read it, open in the separate tab or download. |
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1.0.1 | README.txt was not recognized and displayed at first. It is now in the file hdxfit.html. |
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1.0.0 |