Debug Fortran MEX Files
Notes on Debugging
The examples show how to debug timestwo.F
, found in your
matlabroot
/extern/examples/refbook
folder.
Binary MEX files built with the -g
option do not execute
on other computers because they rely on files that are not distributed with
MATLAB® software. For more information on isolating problems with MEX
files, see Troubleshooting on Write C Functions Callable from MATLAB (MEX Files).
Debugging on Microsoft Windows Platforms
For MEX files compiled with any version of the Intel® Visual Fortran compiler, you can use the debugging tools found in your version of Microsoft® Visual Studio®.
Debugging on Linux Platforms
The MATLAB supported Fortran compiler g95 has a -g
option for building binary MEX files with debug information. Such files can
be used with gdb, the GNU® Debugger. This section describes using gdb.
GNU Debugger gdb
In this example, the MATLAB command prompt >>
is shown in
front of MATLAB commands, and linux>
represents a
Linux® prompt; your system might show a different prompt. The
debugger prompt is <gdb>
.
To compile the source MEX file, type:
linux> mex -g timestwo.F
At the Linux prompt, start the gdb debugger using the
matlab
-D
option:linux> matlab -Dgdb
Start MATLAB without the Java® Virtual Machine (JVM®) by using the
-nojvm
startup flag:<gdb> run -nojvm
In MATLAB, enable debugging with the
dbmex
function and run your binary MEX file:>> dbmex on >> y = timestwo(4)
You are ready to start debugging.
It is often convenient to set a breakpoint at
mexFunction
so you stop at the beginning of the gateway routine.Note
The compiler might alter the function name. For example, it might append an underscore. To determine how this symbol appears in a given MEX file, use the Linux command
nm
. For example:linux> nm
timestwo.mexa64
| grep -i mexfunctionThe operating system responds with something like:
0000091c T mexfunction_
Use
mexFunction
in the breakpoint statement. Be sure to use the correct case.<gdb> break mexfunction_ <gdb> continue
Once you hit one of your breakpoints, you can make full use of any commands the debugger provides to examine variables, display memory, or inspect registers.
To proceed from a breakpoint, type
continue
:<gdb> continue
After stopping at the last breakpoint, type:
<gdb> continue
timestwo
finishes and MATLAB displays:y = 8
From the MATLAB prompt you can return control to the debugger by typing:
>> dbmex stop
Or, if you are finished running MATLAB, type:
>> quit
When you are finished with the debugger, type:
<gdb> quit
You return to the Linux prompt.
Refer to the documentation provided with your debugger for more information on its use.