MSKCC CGDS Cancer Genomics Toolbox

版本 1.5.0.0 (23.9 KB) 作者: Erik Larsson
Functions for retrieving data from the Cancer Genomics Data Server (CGDS) at MSKCC cBio.
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1.9K 次下载
更新时间 2013/9/19

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This toolbox provides direct access to cancer genomics data from within the MATLAB environment. The toolbox will query the Cancer Genomics Data Server Web API, provided by the Computational Biology Center at Memorial Sloan-Kettering Cancer Center, and return data in a structured format.

A tutorial ('showdemo cgdstutorial') makes it easy to get started.

引用格式

Erik Larsson (2024). MSKCC CGDS Cancer Genomics Toolbox (https://www.mathworks.com/matlabcentral/fileexchange/31297-mskcc-cgds-cancer-genomics-toolbox), MATLAB Central File Exchange. 检索来源 .

MATLAB 版本兼容性
创建方式 R2009b
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在 Help Center 和 MATLAB Answers 中查找有关 Genomics and Next Generation Sequencing 的更多信息

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版本 已发布 发行说明
1.5.0.0

Version 1.06: Adapted to changes in web API (clinical data). Previous version no longer works correctly. Trailing '/' no longer required in URL. Updated URL in help pages. Updated tutorial for new clinical data format.

1.4.0.0

Bug fixes to cgdstutorial.m
1.3.0.0

Updates to comply with changed naming conventions for case set IDs and genetic profile IDs.

1.2.0.0

Minor update to cgdstutorial.m
1.1.0.0

v1.02 9/5/2011: Adapted to changes in web API.
1.0.0.0