Dice Similarity coefficient error map for 3D image?
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I am want to calculate Dice Similarity Coefficient (DSC) for 3D image and show error map (from 0 to 1). I done it for 2D. But I don't know how to apply it or change for 3D. Could you help me to find the way to calculate DSC for 3D image and display error map in matlab?
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Payam Ahmadvand
2016-2-22
编辑:Payam Ahmadvand
2016-2-22
Hi,
It doesn't matter images is 2D or 3D. If you have your segmentation in a logical volume in which 1 indicates inside the segmentation, this code can calculates Dice:
Seg1 = GroundTruthSeg(:);
Seg2 = YourSeg(:);
VoxelsNumber1=sum(Seg1);
VoxelsNumber2=sum(Seg2);
CommonArea=sum(Seg1 & Seg2);
Dice=(2*CommonArea)/(VoxelsNumber1+VoxelsNumber2);
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