How to assess to the simulation data after the parameter estimation in Simbiology
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Hello team,
I am using command line sbiofit to fit my simbiology model with my experimental data by parameter estimation.
In addition, after I got the fitting results, I know that I could simply plot the fitted results versus the original data by plot(fitResults);
However, I would like to access the simulated results of my best fit to carry out NCA, but I could not find the results in the SimBiology.fit.OptimResults.
Could you please show me a clue on how to get the piece of the simulated data?
Thank you very much.
Have a nice day.
Best,
Jesse
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Arthur Goldsipe
2021-10-19
Hi Jesse,
You can get access to the SimData results used in the plot method by calling the fitted method (described here). If you want to simulate using the parameter estimates but different conditions (for example, different dosing) you can use the predict method (described here). In both cases, the first output will be a vector of SimData of the results.
-Arthur
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Jeremy Huard
2021-10-20
@Jesse Chao Do you mind clicking on my profile and sending me an email so that I have your email address? We can then discuss this offline.
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