I am having a horzcat error while I try to create a structure from smaller structures.

Question

Kostas Chatzimpaloglou 2023-8-5

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https://ww2.mathworks.cn/matlabcentral/answers/2005032-i-am-having-a-horzcat-error-while-i-try-to-create-a-structure-from-smaller-structures

评论： Walter Roberson 2023-8-7

I am having a structure with the name data (1x1) another structure (1x16) that has data inside. and finally a table (1x254) with times values.

I confused If I have bad instruction of how those 3 should be forming a structure to laser use them in EEGLAB with BIOSIG plugin (import the final structure using the pop_biosig command).

my guides to create the structures (1x16) this command

chanlocs = struct('labels', {data.Fp1,data.Fp2, data.F7, data.F3, data.F4, data.F8, data.T3, data.C3, data.C4,data.T4, data.T5, data.P3, data.P4, data.T6, data.O1, data.O2}, ...
                  'type', {'EEG', 'EEG','EEG','EEG', 'EEG','EEG','EEG', 'EEG','EEG','EEG', 'EEG','EEG','EEG', 'EEG','EEG','EEG'}, ...
                  'ref', {char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty}, ...
                  'theta', {-18, 18,-54,-39,39,54,-90,-90,90,90,-126,-141,141,126,-162,162}, ...
                  'radius', {0.511,0.511,0.511,0.333,0.333,0.511,0.511,0.256,0.256,0.511,0.511,0.333,0.333,0.511,0.511,0.511}, ...
                  'X', {0.95,0.95,0.587,0.673,0.673,0.587,6.12e-17,4.4e-17,4.4e-17,6.12e-17,-0.587,-0.673,-0.673,-0.587,-0.95,-0.95}, ...
                  'Y', {0.309,-0.309,0.809,0.545,-0.545,-0.809,0,0.719,-0.719,0,0.809,0.545,-0.545,-0.809,0.309,-0.309}, ...
                  'Z', {-0.0349,-0.0349,-0.0349,0.5,0.5,-0.0349,0.999,0.695,0.695,-0.999,-0.0349,0.5,0.5,-0.0349,-0.0349,-0.0349}, ...
                  'sph_theta', {18,-18,54,39,-39,-54,-0.0349,90,-90,-0.0349,126,141,-141,-126,162,-162}, ...
                  'sph_phi', {-2,-2,-2,30,30,-2,90,44,44,-90,-2,30,30,-2,-2,-2}, ...
                  'sph_radius', {0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0}, ...
                  'urchan',{char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty}, ...
                  'value',{char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty});

then use

[data t chanlocs]

to create this structure to use on EGGLAB.

however I receive the horzcat error which I can seemed to find a way to over come it.

Any ideas to resolve or have further questions to the problem please let me know.

Kostas

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dpb 2023-8-6

编辑：dpb 2023-8-6

Well, the general answer to all of the above is "no, you can't do that" -- it makes no sense to even say it that way.

As far as EEG Lab, from the original Q? it appears the only reason for the question was you ran into an issue of how to build an input dataset that it will accept and your attempt by simply catenating dissimilar data structures you created doesn't work to get you there.

So, the way out of the impasse is NOT to continue to try to do the impossible in MATLAB but to understand what it is that the toolbox/app you're trying to use expects and then build your input to match its requirements.

But, you've given us no references to it; I'm sure it will have doc that will explain its input data structure and that it is possible to create what it needs, but understanding that will have to be the first step; this is non-fruitful direction you're trying in this thread.

ADDENDUM:

So, I DAQGS and found the .org website; it appears to be a very complex app as one might expect; I suggest you need to <begin here to see about importing data>, there appears to be a comprehensive set of steps outlined to follow, but it also doesn't appear there's a traditional MATLAB-like command line interface from an (extremely) quick perusal.

There is <an EEG Lab .set file that appears to be a composite object> but I can't find a definition of its structure. The command to save a .mat file as provided is syntax in MATLAB for the save command, but it doesn't help in explaining the content/form of that user structure that is being saved. That's got to exist somewhere, but like you, at the moment I'm confused as to what that format would be.

It appears you've built the individual structures per the above doc, but I also don't see how to combine them into the composite whole without more time than have to give at the moment.

I'm sure it's documented somewhere and probably if you look at the composite dataset used in the tutorial you could figure it out from a whos on that file, but it does seem like a fundamental concept that should be far more obvious than seems to be in the doc.

Clearly, there is a way to import the data structures into EEG Lab that doesn't require illegal MATLAB syntax that you're trying to use, but the answer is going to be in the EEG Lab community/documentation and probably not from the MATLAB Answers forum unless there does happen to be a regular here who also happens to use it, but I don't recall seeing specific EEG Lab question before so it's probably not likely.

dpb 2023-8-6

"(1x1) x (1x16) should be possible in all cases (ie. structure, arrays, etc.)."

No. It would never be possible other than to combine the two whatevers as a cell array with each cell containing the corresponding object.

MATLAB objects are all regular and the only way any can be catenated is that the types and sizes are commensurate in all respects. Anything else other than stuffing disparate stuff into cells in a cell array is simply not possible.

Walter Roberson 2023-8-6

note by the way that the [] operations does not support scalar expansion.

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Answer 1

dpb 2023-8-6

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此回答的直接链接

https://ww2.mathworks.cn/matlabcentral/answers/2005032-i-am-having-a-horzcat-error-while-i-try-to-create-a-structure-from-smaller-structures#answer_1284042

编辑：dpb 2023-8-6

在 MATLAB Online 中打开

eeglab_dataset.mat

OK, I found where the tutorial <eeglab_data.set> had been uploaded to GitHub so could get a peek at it without downloading the entire package..

eeglab_data.set

Answers won't let attach a file without the approved .mat extension, so I renamed to conform; it's still the same file content, just without the EEG Lab .set extension.

whos -file eeglab_dataset.mat
  Name      Size              Bytes  Class     Attributes

  EEG       1x1             4048648  struct              

So, it is a MATLAB struct -- that we probably had guessed...just what does it comprise of?

Let's load it and see...

load eeglab_dataset   % can dispense with the "-mat" since is using the .mat 
whos EEG              % see what it is...

OK, it is just a single struct; which one of those defined we saw in the description?

EEG
  Name      Size              Bytes  Class     Attributes

  EEG       1x1             4048648  struct              
EEG = struct with fields:
             setname: 'Continuous EEG Data'
            filename: 'eeglab_data.set'
            filepath: ''
                pnts: 30504
              nbchan: 32
              trials: 1
               srate: 128
                xmin: 0
                xmax: 238.3047
                data: [32×30504 single]
             icawinv: []
           icasphere: []
          icaweights: []
              icaact: []
               event: [1×154 struct]
               epoch: []
            chanlocs: []
            comments: [6×769 char]
              averef: 'no'
                  rt: []
    eventdescription: {[2×29 char]  [2×63 char]  [2×36 char]  ''}
    epochdescription: {}
            specdata: []
          specicaact: []
              reject: [1×1 struct]
               stats: [1×1 struct]
          splinefile: []
                 ref: 'common'
             history: ''
             urevent: [1×154 struct]

So there ya' go...you don't append stuff; you put it in the .set .mat struct file as another member -- the chanlocs data here is an empty array; you would assign yours there, it would appear.

NOTA BENE: Some of the field content are themselves struct -- observe 'reject', 'stats', 'urevent'. Also note that 'urevent' is a struct array, not just a single struct. That's how they deal with the mismatch in sizes; EEG Lab has to know how to deal with these struct fields that are structs within the struct; you tell it what they are by adhering to the given naming convention for each.

I think there's a lot more flexibility to load individual defined structs than just loading a single .set file as the example uses, but it'll take learning your way around the package to find out all the ways things can be done.

But, you don't catenate stuff together as you were trying; that's just not legal MATLAB syntax for the most part except for the few specific things that can be made to match as Walter showed.

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dpb 2023-8-6

在 MATLAB Online 中打开

eeglab_dataset.mat

Curiosity and the cat...let's see what those other structs look like, too...

load eeglab_dataset
EEG.reject
ans = struct with fields:
             rejjp: []
            rejjpE: []
           rejkurt: []
          rejkurtE: []
         rejmanual: []
        rejmanualE: []
         rejthresh: []
        rejthreshE: []
           rejfreq: []
          rejfreqE: []
          rejconst: []
         rejconstE: []
          icarejjp: []
         icarejjpE: []
        icarejkurt: []
       icarejkurtE: []
      icarejmanual: []
     icarejmanualE: []
      icarejthresh: []
     icarejthreshE: []
        icarejfreq: []
       icarejfreqE: []
       icarejconst: []
      icarejconstE: []
         rejglobal: []
        rejglobalE: []
         threshold: [0.8000 0.8000 0.8000]
     threshentropy: 600
     threshkurtact: 600
    threshkurtdist: 600
       gcompreject: [1×0 double]
      rejmanualcol: [1 0.9116 0.6464]
      rejthreshcol: [0.8487 1 0.5008]
       rejconstcol: [0.6940 1 0.7008]
          rejjpcol: [1 0.6991 0.7537]
        rejkurtcol: [0.6880 0.7042 1]
        rejfreqcol: [0.9596 0.7193 1]
           disprej: {}
EEG.stats
ans = struct with fields:
              jp: []
             jpE: []
           icajp: []
          icajpE: []
            kurt: []
           kurtE: []
         icakurt: []
        icakurtE: []
        compenta: []
        compentr: []
       compkurta: []
       compkurtr: []
    compkurtdist: []
EEG.urevent(1)
ans = struct with fields:
        type: 'square'
    position: 2
     latency: 129.0087

dpb 2023-8-7

编辑：dpb 2023-8-7

在 MATLAB Online 中打开

chanlocs = struct('labels', {data.Fp1,data.Fp2, data.F7, data.F3, data.F4, data.F8, data.T3, data.C3, data.C4,data.T4, data.T5, data.P3, data.P4, data.T6, data.O1, data.O2}, ...
                  'type', {'EEG', 'EEG','EEG','EEG', 'EEG','EEG','EEG', 'EEG','EEG','EEG', 'EEG','EEG','EEG', 'EEG','EEG','EEG'}, ...
                  'ref', {char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty}, ...
                  'theta', {-18, 18,-54,-39,39,54,-90,-90,90,90,-126,-141,141,126,-162,162}, ...
                  'radius', {0.511,0.511,0.511,0.333,0.333,0.511,0.511,0.256,0.256,0.511,0.511,0.333,0.333,0.511,0.511,0.511}, ...
                  'X', {0.95,0.95,0.587,0.673,0.673,0.587,6.12e-17,4.4e-17,4.4e-17,6.12e-17,-0.587,-0.673,-0.673,-0.587,-0.95,-0.95}, ...
                  'Y', {0.309,-0.309,0.809,0.545,-0.545,-0.809,0,0.719,-0.719,0,0.809,0.545,-0.545,-0.809,0.309,-0.309}, ...
                  'Z', {-0.0349,-0.0349,-0.0349,0.5,0.5,-0.0349,0.999,0.695,0.695,-0.999,-0.0349,0.5,0.5,-0.0349,-0.0349,-0.0349}, ...
...

NOTA BENE: In the description of the EEG (.set file) struct with its fields of data including sub-structs like chanlocs, the data are all shown as normal MATLAB numeric arrays, NOT cell arrays. I think you'll need to convert your generation code to use [] instead of {} for the numeric data.

chanlocs = struct('labels', {data.Fp1,data.Fp2, data.F7, data.F3, data.F4, data.F8, data.T3, data.C3, data.C4,data.T4, data.T5, data.P3, data.P4, data.T6, data.O1, data.O2}, ...
                  'type', {'EEG', 'EEG','EEG','EEG', 'EEG','EEG','EEG', 'EEG','EEG','EEG', 'EEG','EEG','EEG', 'EEG','EEG','EEG'}, ...
                  'ref', {char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty,char.empty}, ...
                  'theta', [-18, 18,-54,-39,39,54,-90,-90,90,90,-126,-141,141,126,-162,162], ...
                  'radius', [0.511,0.511,0.511,0.333,0.333,0.511,0.511,0.256,0.256,0.511,0.511,0.333,0.333,0.511,0.511,0.511], ...
                  'X', [0.95,0.95,0.587,0.673,0.673,0.587,6.12e-17,4.4e-17,4.4e-17,6.12e-17,-0.587,-0.673,-0.673,-0.587,-0.95,-0.95], ...
                  'Y', [0.309,-0.309,0.809,0.545,-0.545,-0.809,0,0.719,-0.719,0,0.809,0.545,-0.545,-0.809,0.309,-0.309], ...
                  'Z', [-0.0349,-0.0349,-0.0349,0.5,0.5,-0.0349,0.999,0.695,0.695,-0.999,-0.0349,0.5,0.5,-0.0349,-0.0349,-0.0349], ...
...

etc., ...

Read through that description of the EEG and ALLEEG struct in the doc CAREFULLY, looking at the examples shown of sample inputs.

It actually is the Hansel and Gretel trail of breadcrumbs through the forest that gives the needed format to use and the other tutorial file (that I didn't find a link to other than downloading the whole enchilada) is more complex and has these substructs populated for examples.

I see that there are more complicated input patterns discussed using the other tutorial file in line in the discussion that illustrate chanlocs struct being in EEG struct, etc., ...

Once one finally gets to the details, it is pretty straightforward; the ".set" file is just a MATLAB .mat file containing the EEG struct as outlined. Although it appears it can also be saved/read as two files; one the metadata and a second that contains the actual raw data.

Walter Roberson 2023-8-7

在 MATLAB Online 中打开

Note:

When you use struct() and the data portion associated with a fieldname is a cell array, then struct() creates one structure member for each element of the cell array, with each element of the cell array in turn being assigned as the member contents. When you use a non-cell then the contents are copied to every struct member.

Example,

out = struct('labels', {'ABC', 'DEF'}, 'X', [1 2 3])
out = 1×2 struct array with fields:
    labels
    X
out(1)
ans = struct with fields:
    labels: 'ABC'
         X: [1 2 3]
out(2)
ans = struct with fields:
    labels: 'DEF'
         X: [1 2 3]

This can lead to code such as

Xvals = [0.95,0.95,0.587,0.673,0.673,0.587,6.12e-17,4.4e-17,4.4e-17,6.12e-17,-0.587,-0.673,-0.673,-0.587,-0.95,-0.95];
Yvals = [0.309,-0.309,0.809,0.545,-0.545,-0.809,0,0.719,-0.719,0,0.809,0.545,-0.545,-0.809,0.309,-0.309];
Zvals = [-0.0349,-0.0349,-0.0349,0.5,0.5,-0.0349,0.999,0.695,0.695,-0.999,-0.0349,0.5,0.5,-0.0349,-0.0349,-0.0349];
thvals = [-18, 18,-54,-39,39,54,-90,-90,90,90,-126,-141,141,126,-162,162];
rvals = [0.511,0.511,0.511,0.333,0.333,0.511,0.511,0.256,0.256,0.511,0.511,0.333,0.333,0.511,0.511,0.511];
N = length(Xvals);
chanlocs = struct('labels', {data.Fp1, data.Fp2, data.F7, data.F3, data.F4, data.F8, data.T3, data.C3, data.C4,data.T4, data.T5, data.P3, data.P4, data.T6, data.O1, data.O2}, ...
                  'type', repmat({'EEG'}, 1, N), ...
                  'ref', repmat({''}, 1, N), ...
                  'theta', num2cell(thvals), ...
                  'radius', num2cell(rvals), ...
                  'X', num2cell(Xvals), ...
                  'Y', num2cell(Yvals), ...
                  'Z', num2cell(Zvals))
Unable to resolve the name 'data.Fp1'.

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I am having a horzcat error while I try to create a structure from smaller structures.

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I am having a horzcat error while I try to create a structure from smaller structures.

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