[~,filenames,~]=xlsread('your_excel_file.xls');
folderInfo = dir('your_folder/*.mat');
folder_filenames = {folderInfo.name};
for iFile=1:numel(filenames)
ind = 0;
ind=find(ismember(folder_filenames,filenames{iFile}));
if(ind~=0)
S(iFile).data=load(folder_filenames{iFile});
% here you could save S(iFile).data in whatever format you want to
% export and save it in different folders.
% save your target folder names in a cell array and use them
% using indexing
ind = 0;
end
end
