MyFisher33

版本 2.0.0.0 (14.2 KB) 作者: Giuseppe Cardillo
A very compact routine to compute Fisher's exact test on a 3x3 matrix
3.1K 次下载
更新时间 2020/12/23

Fisher's exact test of 3x3 contingency tables permits calculation of precise probabilities in situation where, as a consequence of small cell frequencies, the much more rapid normal approximation and chi-square calculations are liable to be inaccurate. The Fisher's exact test involves the computations of several factorials to obtain the probability of the observed and each of the more extreme tables. Factorials growth quickly, so it's necessary use logarithms of factorials. In Matlab this is very easy using the Gammaln function. The function uses preallocation and vectorization to speed-up the computations. Actually, the function also computes the mid-P correction to make the test less conservative.

引用格式

Giuseppe Cardillo (2024). MyFisher33 (https://github.com/dnafinder/myfisher33), GitHub. 检索来源 .

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版本 已发布 发行说明
2.0.0.0

inputparser; table implementation; github link

1.6.0.0

Minor bug correction

1.4.0.0

Changes in description

1.3.0.0

Actually, the function also computes the mid-P correction to make the test less conservative.

1.2.0.0

Improvements in table enumeration

1.1.0.0

Changes in help section

1.0.0.0

Speeding up using preallocation and gammaln calculation

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