Import SBML file with function definitions into SimBiology
These functions allow you to import SBML files containing function definitions into SimBiology.
Two methods are available:
- sbmlimportFunExternal
This function saves each function definition as separated MATLAB function in the current directory.
The resulting SimBiology model supports the 'Model acceleration' mode.
Function definitions containing the MathML function 'piecewise' are also supported.
In that case, to ensure that the ODE solver registers the transitions events are added to the SimBiology model.
- sbmlimportFunReplace
This function replaces all function calls in the reaction rates by the associated expressions.
The resulting SimBiology model supports the 'Model acceleration' mode.
It does not support the use of the MathML function 'piecewise' in the function definitions.
Usage:
sbmlimportFunExternal()
sbmlimportFunExternal(filename)
sbmlimportFunReplace()
sbmlimportFunReplace(filename)
引用格式
Jeremy Huard (2024). Import SBML file with function definitions into SimBiology (https://www.mathworks.com/matlabcentral/fileexchange/51551-import-sbml-file-with-function-definitions-into-simbiology), MATLAB Central File Exchange. 检索时间: .
MATLAB 版本兼容性
平台兼容性
Windows macOS Linux类别
标签
社区
Community Treasure Hunt
Find the treasures in MATLAB Central and discover how the community can help you!
Start Hunting!版本 | 已发布 | 发行说明 | |
---|---|---|---|
1.1.0.1 | Updated license |
||
1.1.0.0 | -Both methods:
- sbmlimportFunExternal:
|
||
1.0.0.0 | - Updated function headers.
|