glerny/finnee

# What is Finnee
Finnee is a Matlab toolbox that was developed to post processed dataset obtained using separation techniques hyphenated with high-resolution mass spectrometry. Finnee uses mzML files. Tutorials and detailed explanations can be found at https://finneeblog.wordpress.com/.
# Finnee v3.1
This is the final version for Finnee; it has been replaced by a new toolbox, Finnee2016, that make use of oriented object programming .

# References
Finnee has been used in two published manuscripts.
1. Erny, G.L, Acunha, T., Simó, C., Cifuentes, A., Alves, A. Finnee—A Matlab toolbox for separation techniques hyphenated high-resolution mass spectrometry dataset, Chemometrics and Intelligent Laboratory Systems 155 (2016) 138-144; doi: 10.1016/j.chemolab.2016.04.013
2. Erny, G.L, Acunha, T., Simó, C., Cifuentes, A., Alves, A. Algorithm for comprehensive analysis of datasets from hyphenated high-resolution mass spectrometric techniques using single ion profiles and cluster analysis, Journal of Chromatography A,1429 (2016) 134-141; doi: 10.1016/j.chroma.2015.12.005

# Acknowledgments
This work was financially supported by the projects: (i) POCI-01-0145-FEDER-006939 (Laboratory for Process Engineering, Environment, Biotechnology and Energy – UID/EQU/00511/2013) funded by FEDER funds through COMPETE2020- Programa Operacional Competitividade e Internacionalizacao (POCI) and by national funds through FCT - Fundacao para a Ciencia e a Tecnologia; (ii) NORTE‐ 01‐ 0145‐ FEDER‐ 000005 – LEPABE-2-ECO-INNOVATION, funded by FEDER funds through COMPETE2020 - Programa Operacional Competitividade e Internacionalizacao (POCI) and Programa Operacional Regional do Norte (NORTE2020); (iii) by FEDER funds through the Operational Program for Human Potential and by National Funds through FCT-Foundation for Science and Technology under the project IF/00528/2013.