VolumeCut

版本 6.3 (3.0 MB) 作者: Luca Della Santina
Free-form cutter for volumetric images
0.0
(0)
147.0 次下载
更新时间 2021/6/30
在 GitHub 上查看许可证

VolumeCut allows you to cut an image volume along surfaces of arbitrary shape.

Surfaces are defined by interpolation of sets of coordinates (X,Y,Z) provided by the user as a Matlab marix [n x 3].

Features of this app include:
+ Support for input image format: 8-bit 3D TIFF
+ Automatic voxel calibration when images are saved with ImageJ / FIJI
+ Custom offset can be defined for each surface
+ Custom smoothness level of interpolated surface
+ 4 different cut modes allowing to provide up to three cutting surfaces
+ Volume visualization using Matlab's 3D volume renderer
+ Save cut image volumes with black voxels in the cut region
+ Save masks used to cut the image stack
+ Mathematical operations on 3D masks: unite, intersect, exclude, subtract, invert, find edges, fill holes, close
+ Display and manipulate digital skeletons created with ImageJ's Simple Neurite Tracer

To download the latest version and for more information, visit: https://lucadellasantina.github.io/VolumeCut/

引用格式

Luca Della Santina (2024). VolumeCut (https://github.com/lucadellasantina/VolumeCut/releases/tag/v6.3), GitHub. 检索来源 .

MATLAB 版本兼容性
创建方式 R2021a
与 R2021a 及更高版本兼容
平台兼容性
Windows macOS Linux
类别
在 Help Center 和 MATLAB Answers 中查找有关 Biomedical Imaging 的更多信息

Community Treasure Hunt

Find the treasures in MATLAB Central and discover how the community can help you!

Start Hunting!

ImarisXTensions

无法下载基于 GitHub 默认分支的版本

版本 已发布 发行说明
6.3

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v6.3
6.1.0.0

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v6.1
6.0.0.0

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v6.0
5.1.0.0

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v5.1
5.0.0.0

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v5.0
4.9.0.0

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v4.9
4.8

Support for 2D binary masks
New Batch mode: Keep largest object
4.7.0.0

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v4.7
4.6

New Automation option to intensity histograms within masked volume
App now starts centered within the screen
During batch processing an interruptible progress bar informs of status
4.5

Automated tab allows batch measurements across mask images
4.4.0.0

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v4.4
4.3

Fixed bug causing missing interactivity with 3D plots
4.2.0.0

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v4.2
4.0

Digital skeleton management
3.3

"Close" and "Fill Holes" now iterate on each Z plane individually for better results than the old pure 3D functions.
3.2

New mask functionalities: Erode, Dilate, Close, Fill, Skeletonize, Ultimate erode, Median filtering
3.1

Mask info button shows mask statistics and overlap volume
3.0

2.3.0.0

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v2.3
2.2.0.0

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v2.2
要查看或报告此来自 GitHub 的附加功能中的问题，请访问其 GitHub 仓库。
要查看或报告此来自 GitHub 的附加功能中的问题，请访问其 GitHub 仓库。