renameBlock
Description
renameBlock(
changes the current names of the blocks to lib
,currentNames
,newNames
)newNames
.
Examples
Find and Rename Bioinformatics Pipeline Blocks from Block Library
Import the pipeline, block, and library objects needed for the example.
import bioinfo.pipeline.library.* import bioinfo.pipeline.block.* import bioinfo.pipeline.Pipeline
Create a library and add it to the list of available libraries.
mylib = Library;
mylib.Name = "customLib";
addLibrary(mylib);
Create a FeatureCount
block and a FileChooser
block for a FASTQ file, that is provided with the toolbox and add to the library.
fcBlock = FeatureCount;
fastqfile = FileChooser(which("SRR005164_1_50.fastq"));
Add the blocks to the library. Name the blocks as "featurecount" and "fastqfile", respectively.
addBlock(mylib,fcBlock,"featurecount"); addBlock(mylib,fastqfile,"fastqfile");
Find a block by its name from the library.
b1 = findBlock(mylib,"featurecount")
b1 = FeatureCount with properties: Options: [1x1 bioinfo.pipeline.options.FeatureCountOptions] Inputs: [1x1 struct] Outputs: [1x1 struct] ErrorHandler: []
You can also search for multiple blocks.
bArray = findBlock(mylib,["fastqfile","featurecount"]); length(bArray)
ans = 2
Rename the "featurecount" block to "fcBlock".
renameBlock(mylib,"featurecount","fcBlock"); mylib.BlockNames
ans = 2x1 string
"fastqfile"
"fcBlock"
Input Arguments
lib
— Block library
bioinfo.pipeline.library.Library
Block library, specified as a bioinfo.pipeline.library.Library
object.
currentNames
— Current names of blocks
character vector | string scalar | ...
Current names of blocks, specified as a character vector, string scalar, string vector, or cell array of character vectors.
newNames
— New names of blocks
character vector | string scalar | ...
New names of blocks, specified as a character vector, string scalar, string vector, or cell array of character vectors. The new names must be valid variable names and must be unique within the library.
Version History
Introduced in R2023a
See Also
bioinfo.pipeline.library.Library
| addBlock
| findBlock
| removeBlock
| Biopipeline Designer
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