How can I indicate significance in boxplots?
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Hi guys,
I would like to compare data of several groups using boxplots. Therefore, I put 4 boxes beside each other. Now I am looking for a possibility to display asterisks over the boxplots (* for p<0.05, * * for p<0.01, ...) and also brackets to make clear which groups are significantly different at which level. To see what I am hoping to be able to do you can go on that page: http://www.frontiersin.org/files/Articles/1379/fnsys-04-00033-r1/image_m/fnsys-04-00033-g004.jpg (this is not my figure, but I would like to do something similar).
Do you have any idea which commands or toolboxes could be helpful in this case?
Thanks a lot!
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Star Strider
2015-2-12
For your box plot, experiment with this to get the result you want:
d = randi(10, 20, 3);
figure(1)
boxplot(d)
yt = get(gca, 'YTick');
axis([xlim 0 ceil(max(yt)*1.2)])
xt = get(gca, 'XTick');
hold on
plot(xt([2 3]), [1 1]*max(yt)*1.1, '-k', mean(xt([2 3])), max(yt)*1.15, '*k')
hold off
The ‘xt’ and ‘yt’ variables get the x-tick and y-tick values, and are then used to do the ‘sigline’ and asterisk calculations on. The axis call simply creates room at the top of the plot box for the line and asterisk.
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Jake Ogata Bernstein
2020-7-24
One thing I also discovered is you may have to adjust the y-axis range in the axis call. For example, I'm working with data that range from -23 to +18, so I rewrote the axis call as
axis = ([xlim -25 ceil(max(yt)*1.2)])
Himanshu Saxena
2021-7-12
It seems these commands do not work for boxchart command. Is there any other way to do the same for boxchart?
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