Hi Ethan,
As per my understanding you want to stop/avoid the pop-up’s which are result of your MATLAB code because it directs you to its respective window from the current one.
I am assuming the pop-ups to which you're referring are related to the figure.
There are two ways to hide the figure window pop-up’s,
The first method is to set the ‘WindowState’ property to ‘minimized’.
Here is an example code snippet to help you understand it better.
v=figure;
v.WindowState = 'minimized'
Second method, we can set the figure visibility to ‘off’,as shown below.
Here is an example code snippet to help you understand it better.
v=figure;
v.Visibility = ‘off’
These methods will help you to avoid the figure window pop-up’s
