- Use the “crossval” function to perform k-fold cross-validation on your decision tree classifier model (Mdl). Set the number of folds to 5 using the “kFold” option.
- After cross-validation is complete, you can use the “kfoldPredict” function to obtain the predicted labels for each fold.
- Compare the predicted labels with the true labels (y) to calculate the accuracy for each fold.
- Calculate the mean and standard deviation of the accuracy values obtained from the previous step.
How to know classification mean and standard deviation accuracy of a cross validated classifier?
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I am training a optimized decision tree classifier using the function 'fitctree' and cross validated it using 5 kFold. I wanted to know the accuracy of the classificaton for each fold, so that I can calculate the mean and the standard deviation of the accuracy of each fold. Is there any way to do that? I've been searching for a while and haven't found any answer. The closest answer that I was getting was using 'kfoldLoss', but I don't understand how it would correlate to the one that I asked. Here is my code.
Mdl = fitctree(x(:, [427, 195, 121, 120, 122, 80, 43, 83, 34, 411, 317, 276, 303, 68, 66, 441, 76, 50, 69]), y,'OptimizeHyperparameters','auto',...
'HyperparameterOptimizationOptions',struct('AcquisitionFunctionName','expected-improvement-plus'));
CVMdl = crossval(Mdl, 'kFold', 5);
x is the features and y is the output class. Thank you for your help in advance.
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Rohit
2023-8-29
I understand that you want to calculate the accuracy of the classification for each fold and then compute the mean and standard deviation.
To achieve this, you can follow these steps:
CVMdl = crossval(Mdl, 'kFold', 5);
% Perform k-fold cross-validation predictions
kfold_pred = kfoldPredict(CVMdl);
You can refer to these documentation links for further reference:
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