lsqcurvefit does not follow convergence criteria in summation.
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I have a function that uses summation to fit an bi-exponential function. Because I have to retrieve other information from that fit, I cannot use the exp2-fit function unfortunately. As for the procedure over the 8 parts (n=8). The data is in t(xdata) and S(ydata). For each of the terms 1-8 the individual contribution (yfit_n) is calculated and then added up together to get the final results for the fit (yfit). The fucntion has 7 variables for the fitting in the vector x or x0 for the respective startin point (x(2) is not used at this stage).
FS_1=0.05;
FS_2=2.0264;
d=1E-4;
dy=1E-5;
n=1:8;
t=t_S_mathworks(:,1);
S=t_S_mathworks(:,2);
x0=rand(7,1);
fun=@(x,t) x(1)+x(3).*(FS_1+FS_2*sum(((-1.^n)./n.^2).*(1-cos(n*pi*dy/d))...
.*(x(4).*exp(-x(6)*(t).*n.^2.*pi^2./d^2)...
+x(5).*exp(-x(7)*(t).*n.^2.*pi^2./d^2)),2));
options.OptimalityTolerance = 1e-15;
[x,resnorm]=lsqcurvefit(fun,x0,t,S);
Because I got the flag that indicates that the convergence criterion is too low I wanted to change, but it was incorporated in the fit-options, I think.
After the fit has converged (but not giving a useful result) I checked for the convergence criterion and it wasn't replaced with the new one of 1E-15.
Optimization completed: The first-order optimality measure, 1.132517e-08,
is less than options.OptimalityTolerance = 1.000000e-06.
And when I check for the fit using
S_fitted =x(1)+x(3).*(FS_1+FS_2*sum(((-1.^n)./n.^2).*(1-cos(n*pi*dy/d))...
.*(x(4).*exp(-x(6)*(t).*n.^2.*pi^2./d^2)...
+x(5).*exp(-x(7)*(t).*n.^2.*pi^2./d^2)),2));
plot(t,S_fitted)
I see that only the first two data points gave a result other than the minium of data points. So it seems that the fitting itself did not happen. I inlcued the data to let you see of that error is reproducable. I hope that it is just a bening error I cannot seem locate right now.
All help is appreciated.
All the best,
Chris
3 个评论
采纳的回答
Matt J
2023-5-27
After the fit has converged (but not giving a useful result) I checked for the convergence criterion and it wasn't replaced with the new one of 1E-15.
Because you have not passed the options variable to lsqcurvefit
options.OptimalityTolerance = 1e-15;
[x,resnorm]=lsqcurvefit(fun,x0,t,S,[],[],options);
7 个评论
Matt J
2023-5-30
编辑:Matt J
2023-5-30
I imagine it is because you are using a random initial guess, x0. If you initialize with Alex's solution, or values close to it, I would bet that you will get a more reasonable looking fit.
In any case, it is unrelated to your posted question. Your question was why the optimization was not obeying your options settings, and that has been solved.
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