how to change the image from axial to sagittal

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mohd akmal masud
mohd akmal masud 2024-10-11
评论： Matt J 2024-10-11
Dear All
I have Image as you can download from link here (https://drive.google.com/file/d/1UWWDY07p4QJKOhkTj-CSe4tZcU8cjmeV/view?usp=sharing).
But when I evelaute my coding, the image show as axial view. Anyone know how to change it into sagittal view?
clc
clear all
close all
sz = [128 128 128];
fname = 'jaszak166_dew_w2.h00_it4.img';
fid = fopen(fname);
data = fread(fid,'*float'); % assuming uint
fclose(fid);
% this is blindly devectorized
% may still be transposed, but i can't tell due to symmetry
% note that data is binarized on a [0 1000] scale in uint16
% so if viewing in a denormalized manner, it'll just appear black
% normalize or rescale it as needed
data = reshape(data,sz);
imtool3D(data)
  2 个评论
Vinay
Vinay 2024-10-11
Hi @mohd akmal masud, the drive link is not accessible. Could you please share the image in the comments section instead?
mohd akmal masud
mohd akmal masud 2024-10-11
Dear @Vinay, here you go https://drive.google.com/file/d/10EUsydCVzIYAaQMXOvzzg4K9L6nw6SLc/view?usp=sharing

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采纳的回答

Matt J
Matt J 2024-10-11
imtool3D() is not a native Matlab function, but I imagine if you permute your data permute(data,[3,1,2]) so that its slices are sagittally aligned, it will display the way you wish.
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mohd akmal masud
mohd akmal masud 2024-10-11
Dear @Matt J
the images can get https://drive.google.com/file/d/10EUsydCVzIYAaQMXOvzzg4K9L6nw6SLc/view?usp=sharing
Matt J
Matt J 2024-10-11
Writing to dicom is a tricky thing, but also seems unnecessary for the purposes of your posted question. imtool3D doesn't need its input in DICOM form.

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