Have you stepped in using the debugger? Does it ever enter the code in the if statement?
While loops is not responding
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I wrote the following while loop, but when the if statement is answered, nothing happens.
while 1
k=StartToe+1;
if PairsMat(PrF(end),k)<=3
OligoPaints{i,:}=strcat(ReverseComplement(Toes(PrF(end),:),1),MainCell{i,8},ReverseComplement(Toes(k,:),1));
PrR(q)=k;
q=q+1;
disp(k)
break
else
k=k+1;
if k==size(PairsMat,1)
errordlg('No matching toes')
break
end % if k==size(PairsMat,1)
end % if PairsMat(PrF(end),k)<=3
end % while 1
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