Getgenpept and getgenbank with https change in ncbi site

1 次查看(过去 30 天)
Yesterday (22nd Sept) the getgenpept function in the bioinformatics toolbox stopped working for a few hours whilst the NCBI were testing their new protocol requiring https instead of http. There are a couple more test slots scheduled ( NCBI https tests ) and it will switch over completely from Tuesday (27th Sept).
I'm currently teaching a course which relies on this function for getting the data for much of the coursework. I will obviously download the key data for future assignments before Tuesday and make it available to the students, but I was wondering if anyone could come up with a Matlab based work-around, for my students as I would prefer for them to not be limited to the data I provide.

回答(2 个)

Paola Favaretto
Paola Favaretto 2016-9-23
Please contact MathWorks Tech Support. They will be able to provide you with a patch or a suitable workaround.

Paola Favaretto
Paola Favaretto 2016-12-13
编辑:Paola Favaretto 2016-12-23
After the transition to https at NCBI (effective November 2016), GETGENBANK, GETGENPEPT and other functions accessing NCBI web servers fail.
You can download a patch for previous releases here .

类别

Help CenterFile Exchange 中查找有关 Genomics and Next Generation Sequencing 的更多信息

Community Treasure Hunt

Find the treasures in MATLAB Central and discover how the community can help you!

Start Hunting!

Translated by