3D view of atoms and Lattice (or perspective View)

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mostafa 2017-8-22

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https://ww2.mathworks.cn/matlabcentral/answers/353578-3d-view-of-atoms-and-lattice-or-perspective-view

编辑： mostafa 2017-9-1

3D view of atoms and Lattice (or perspective View)

I'd like to show substrate and layers that growth on it in the 3D view. For my master thesis. For example, I have a 3D Matrix that shows where is each atom. And want to show a 3D view (or perspective View) of it (For example as attached pictures).

can anyone help me?

My English does not good, Excuse me for any unintelligible sentences.

pictures:

zoom Images to see the atoms and shadows.

I need the same perspective view. to can print it. and also can zoom it in PDF print. https://image.ibb.co/kBH8SF/atoms_3_D_view_on_substrate_1.jpg

https://image.ibb.co/kBH8SF/atoms_3_D_view_on_substrate_2.jpg

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KSSV 2017-8-22

What data you have to plot the pictures?

mostafa 2017-9-1

编辑：mostafa 2017-9-1

the data is a 3-Dimension matrix. Each pixel has a number that shows which kind of atom exist (for example, "1" for Ga atoms, "2" for another atom, and "0" for vacancies.).

you can create a random matrix by "Mat = randi(2,6,6,10);" that is similar to my data.

I need to show each pixel as a ball with gray color respect to its value and also has a shadow respect to a view point (as similar to the images attached above).

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