Size mismatch when using Mex function?

I've converted a piece of matlab code to C/mex in order to improve performance of computationally intensive step. Within the algorithm, I look for a value within an array as follows:
Ck = find(COM==Cnew);
When I do this, I get the following error running the mex function..
Sizes mismatch: [1][5000] ~= [1][1]. More information Error in ClusterMex (line 73) Ck = find(COM==Cnew);
I declare Cnew at the top of a while loop as Cnew=[] in order to set its type for the C compilation and it seems to be reading it as such but when it tried to do this comparison, it is unable in the mex function.
Thanks for the help!

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What is the declared size of Ck? Did you use coder.varsize() for it?

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