How extract skull ?

how to extract the skull from the brain (other than the thresholding method) ?

2 个评论

how did you segment the skull??
Ash, I don't know if marwa ever did. However, if you're interested in a thresholding method (which marwa is NOT ) then you can see my attached demo.

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回答(2 个)

Image Analyst
Image Analyst 2018-2-17

0 个投票

You can use manual tracing. See attach demos for imfreehand().

7 个评论

thank you but I need an automatic way ?
Then look at deep learning. It's the only other way I know of without thresholding in it explicitly. However you know that deep learning has thresholding internal to the algorithm, though it's hidden from you.
Why do you need a way without thresholding?
I see your thresholding method for skull extraction ( https://www.mathworks.com/matlabcentral/answers/uploaded_files/70212/test3.m) But if we change the image we must change the threshold value each time)
Yes, though you could come up with an automatic threshold selection algorithm that could perhaps pick what you'd pick yourself.
please can you help me in this task : how to segment brain lesions using intra class variation and morphological operation as in this figure and thanks in advance
Sorry, no.
Perhaps I can help if you give something much, much smaller to ask about rather than programming up a whole algorithm, which could take hours to months to do.
ok thanks

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Robert Welsh
Robert Welsh 2019-2-10

0 个投票

Lots of preexisting packages out there that are free for acadmic use:
SPM (which runs on matlab)
FSL (compiled c++ runs on LINUX and MAC OS X)
ANTs (runs on LINUX and MAC OS X)
Googling will get you the links.

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