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Quantifying how good an alignment is?

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Hussam Ibrahim
Hussam Ibrahim 2018-3-8
评论： Rik 2018-3-8
I have an experiment where I am taking an image every 5 min of the same cell, but I want to monitor positional drift of my setup. I have an alignment program that scales the image based on an initial image.
I can plot the image with and without alignment, but I am looking for a method to quantify this. Is there a matlab function that can return a coefficient of alignment to check how good an alignment is?

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