How to Run a Matlab function using .sbatch file
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Hi I am new to slurm and I am trying to run a MATLAB function (I cannot use MDCS because that apparently is not available on one of my available HPC clusters)
I think I am having trouble with understanding the appropriate notation for running a script vs a function using slurm.
These are the two pieces of code that I have seen:
matlab -nodisplay < multi_parfor.m
and...
matlab -nodesktop -r "multi_parfor.m"
I was wondering if anyone could explain how to do this, and maybe make a comment on the use for each of the above lines of code (is one for a script and one for a function? etc).
Thank you in advance
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Destiny Ellenor
2020-11-8
You can pass the input arguments for a funtion like this:
srun matlab -nodisplay -singleCompThread -r "FunctionFileName(INPUTArg1,INPUTArg2,INPUTArg3)"
If it is just a script, and not a function, this is how you would write it:
srun matlab -nodisplay -singleCompThread -r "ScriptFileName"
Compute Canada documention has a clear outline on how to write a Slurm submission script to submit a MATLAB job:
And this matlab documentation outlines the syntax/commands of the line above:
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