Installing openexr in Matlab

Question

Imran Kanjoo 2020-10-12

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此问题的直接链接

https://ww2.mathworks.cn/matlabcentral/answers/611336-installing-openexr-in-matlab

评论： Walter Roberson 2022-9-23

I am trying to install OpenExr to read .exr files but I get some error which do no understand. I have downloaded the scripts from this and this link. In the instruction file, it has been mentioned to put correct paths.

the downloaded files are located as

D:\D\ZJU Data\HDR\softwre\openexr

D:\D\ZJU Data\HDR\softwre\openexr\IlmImf

D:\D\ZJU Data\HDR\softwre\openexr\Half

D:\D\ZJU Data\HDR\softwre\openexr\Iex

D:\D\ZJU Data\HDR\softwre\openexr\IlmThread

D:\D\ZJU Data\HDR\softwre\openexr\Imath

The make.m file is modified for the paths to make the file as below

clc;
verbose = false;
% -----------------------------------------------
build_files = { 'exrinfo.cpp', ...
                'exrread.cpp', ...
                'exrreadchannels.cpp', ...
                'exrwrite.cpp', ...
                'exrwritechannels.cpp'};
             
companion_files = { 'utilities.cpp', ...
                    'ImfToMatlab.cpp', ...
                    'MatlabToImf.cpp'};
additionals = {};
if(verbose == true)
  additionals = [additionals, {'-v'}];
end
for n = 1:size(build_files, 2)
  if(verbose == true)
    clc;
  end
  
  file = cell2mat(build_files(n));
  
  disp(['Building ', file]);
  
  mex(file, companion_files{:}, ...
    '-D:\D\ZJU Data\HDR\softwre\openexr\OpenEXR', ...
    '-D:\D\ZJU Data\HDR\softwre\openexr\', ...
          '-IlmImf', ...
          '-Iex', ...
          '-Imath', ...
          '-IHalf', ...
          '-IlmThread', ...
    '-largeArrayDims', ...
    additionals{:});
end
clear;
disp('Finished building OpenEXR for Matlab');

But I get the foloowing error

Error using mex

g++: error: Files\MATLAB\R2018b/extern/include -IC:\Program: Invalid argument

g++: error: Files\MATLAB\R2018b/simulink/include -fexceptions -fno-omit-frame-pointer -std=c++11 -O2 -fwrapv -DNDEBUG D:\D\ZJU: Invalid argument

g++: error: Data\HDR\softwre\openexr\exrinfo.cpp -o C:\Users\IMRANK~1\AppData\Local\Temp\mex_230748490719102_4660\exrinfo.obj : Invalid argument

g++: fatal error: no input files

compilation terminated.

I am using MinGW64 compiler.

Can you please tell me what exactly is the error?

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Zaixi Shang 2020-10-20

I am doing the same thing and get similiar problem. The auther of this code doesn't maintain the project anymore...

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Answer 1

Sofía Miñano 2021-3-20

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https://ww2.mathworks.cn/matlabcentral/answers/611336-installing-openexr-in-matlab#answer_653567

在 MATLAB Online 中打开

I think you may have mistaken the -D flag in the mex command with the -I and -L flags. From the docs: "The -D options define C preprocessor definitions". The -I flag points to the 'include' directory and the -L and -l flags are used to point to the relevant libraries.

In case it's useful, here are the steps I used to compile the OpenEXR bindings from the site you referenced. I used a Windows 10 machine and Anaconda as package mananger.

1. Get OpenEXR C++ library from Anaconda here. For me it saves the package at: C:\Users\Sofi\Anaconda3\pkgs\openexr-2.5.5-hab3b255_0

2. Get IlmBase from Anaconda here. Saves it at: C:\Users\Sofi\Anaconda3\pkgs\ilmbase-2.5.5-h12d4b20_0

3. Get OpenEXR Bindings for MATLAB from here

4. Modify the make.m script from the MATLAB bindings to point to the correct directories. In particular you need to point to:

- the include libraries of OpenEXR and IlmBase

- the parent folders for the libraries IlmImf, Iex, Imath, Half and IlmThread. I input these paths as -L<libraryfolder> -l<libraryname> (MATLAB expands it to .lib)

- After this, I was getting a 'error LNK2019' when running the make.m script. To fix it you need to:

- add a processor definition for OPENEXR_DLL, with the -D flag for mex

- remove a processor definition for HALF_EXPORT, with the -U flag

This is how the final input to the mex function looked like for me:

mex(file, companion_files{:}, ... 
      '-DOPENEXR_DLL','-UHALF_EXPORT',... % to fix _toFloat link issue and _eLut link issue
      '-Ic:\Users\Sofi\Anaconda3\pkgs\openexr-2.5.5-hab3b255_0\Library\include\OpenEXR',...  OpenEXR include
      '-Ic:\Users\Sofi\Anaconda3\pkgs\ilmbase-2.5.5-h12d4b20_0\Library\include\OpenEXR',...  Ilmbase include
      '-Lc:\Users\Sofi\Anaconda3\pkgs\openexr-2.5.5-hab3b255_0\Library\lib\', '-lIlmImf',... %path to IlmImf.lib
      '-Lc:\Users\Sofi\Anaconda3\pkgs\ilmbase-2.5.5-h12d4b20_0\Library\lib\','-lIex',... %path to Iex.lib
      '-Lc:\Users\Sofi\Anaconda3\pkgs\ilmbase-2.5.5-h12d4b20_0\Library\lib','-lImath',... %path to Imath.lib
      '-Lc:\Users\Sofi\Anaconda3\pkgs\ilmbase-2.5.5-h12d4b20_0\Library\lib','-lHalf',... %path to Half.lib
      '-Lc:\Users\Sofi\Anaconda3\pkgs\ilmbase-2.5.5-h12d4b20_0\Library\lib','-lIlmThread',... %path to IlmThread.lib
    '-largeArrayDims', ...
    additionals{:});

After compiling the bindings, I got a dependency error when trying to use the exr functions: 'Invalid MEX-file mexfilename: The specified module could not be found.' To fix it I followed the documentation here. In my case, I needed to add to the system PATH the directories containing the .dll files from OpenEXR, IlmBase and Zlib (which I also got from Anaconda). You can also add these directories to the system path for the current Matlab session using the setenv command. For my case:

setenv('PATH', [getenv('PATH')...
			 ';C:\Users\Sofi\Anaconda3\pkgs\openexr-2.5.5-hab3b255_0\Library\bin'...
			 ';C:\Users\Sofi\Anaconda3\pkgs\ilmbase-2.5.5-h12d4b20_0\Library\bin'...
			 ';C:\Users\Sofi\Anaconda3\pkgs\zlib-1.2.11-h62dcd97_4\Library\bin']);

Alternatively, you can just copy the required .dll files to the same folder the mex file is at.

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凤年 2022-7-11

Hello, I take the liberty to ask you, this program has this error: 'Invalid MEX-file mexfilename: The specified module could not be found.'.I copied the .dll files needed by this program and put it where the mex file exists。I also tried the other two methods, but the error still occurs.

I would appreciate it if you could tell me how to fix this error。

Below is what I tried

Walter Roberson 2022-9-23

Also the original poster was having problems due to space in the directory name.

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Answer 2

Dinesh Iyer 2022-9-23

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此回答的直接链接

https://ww2.mathworks.cn/matlabcentral/answers/611336-installing-openexr-in-matlab#answer_1059580

If you are still looking to read EXR files in MATLAB, the Image Processing Toolbox has added EXR reading and writing capabilities in R2022b. The functions available are:

exrread
exrinfo
exrwrite
isexr
exrHalfAsSingle

Hope this helps.

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