SimFunction

Empty array [] or empty cell array {}, meaning to perform simulations using the baseline initial values, that is, the values listed in the Parameter property of the SimFunction object, without altering them.

Matrix of size S-by-P, where S is the number of simulations to perform and P is the number of parameters specified in the params argument when you called createSimFunction to construct F. Each simulation is performed with the parameters specified in the corresponding row of phi.

S-by-V matrix of variant objects or a cell column vector of length S, where each element consists of a row vector of variant objects. S is the number of simulations to perform, and V is the number of variant objects. These variants are only allowed to modify the SimFunction input parameters, that is, model elements that were specified as the params input argument when you called createSimFunction. In other words, you must specify the variant parameters as the input parameters when you create the SimFunction object. Any SimFunction input parameters that are not specified in the variants use their baseline initial values.

If, within a row of variants, multiple entries refer to the same model element, the last occurrence is used for simulation.

Scalar SimBiology.Scenarios object containing S number of scenarios.

Specify a nonnegative scalar to use as the same stop time for all simulations.

Specify a numeric vector of size N to use as a stop time for each simulation in a total of N simulations.

Empty array [] to apply no doses during simulation unless you specify phi as a Scenarios object that has doses defined in its entries.

table of dosing information with two or three variables containing ScheduleDose data (ScheduleDose table), namely, dose time, dose amount, and dose rate (optional). Name the table variables as follows.

u.Properties.VariableNames = {'Time','Amount','Rate'};

If UnitConversion is on, specify units for each variable. For instance, you can specify units as follows.

u.Properties.VariableUnits = {'second','molecule','molecule/second'};

This table can have multiple rows, where each row represents a dose applied to the dose target at a specified dose time with a specified amount and rate if available.

table with one row and five variables containing RepeatDose data (RepeatDose table). Dose rate variable is optional. Name the variables as follows.

u.Properties.VariableNames = {'StartTime','Amount','Rate','Interval','RepeatCount'};

If UnitConversion is on, specify units for each variable. Units for 'RepeatCount' variable can be empty '' or 'dimensionless'. The unit of the 'Amount' variable must be dimensionally consistent with that of the target species. For example, if the unit of target species is in an amount unit (such as mole or molecule), then the 'Amount' variable unit must have the same dimension, i.e., its unit must be an amount unit and cannot be a mass unit (such as gram or kilogram). The unit for the 'Rate' variable must be dimensionally consistent as well.

u.Properties.VariableUnits = {'second','molecule','molecule/second','second','dimensionless'};

Cell array of tables of size 1-by-N, where N is the number of dose targets. Each cell can represent either table as described previously.

Cell array of tables of size S-by-N, where S is the number of simulations and N is the number of dose targets. Each cell represents a table. S is equal to the number of rows in phi.

If u is a cell array of tables, then:

Vector of monotonically increasing output times that is applied to all simulations

Cell array containing a single time vector that is applied to all simulations

Cell array of vectors representing output times. The ith cell element provides the output times for the ith simulation. The number of elements in the cell array must match the number of rows (simulations) in phi.