Caught in loop

My code is as follows:
alpha = 0.5;
beta = 0.1;
a_0 = 1;
dr = 0.1;
dt = input('Value of dt:');
h = 0.001;
c_inf = 0;
c_a = 1;
c_s = 2;
mesh_points = 3;
rho = dt/(dr)^2;
R= 30;
N_i = R/dr;
t_diss = 5.8;
N_t = t_diss/dt;
if rho >= 0.5;
disp('Invalid dt value');
return;
end
for i=1:N_i;
r(i)=(i-1)*dr;
if r(i)< a_0
c(i,1)= c_s;
else
c(i,1)= c_inf;
end
end
a(1) = a_0;
for j = 1:N_t -1;
b_1 = floor (a(j)/dr) + 2;
b_2 = b_1 + 1;
c_ah = (a(j)+h-b_1)*(a(j)+h-b_2)*(c_a)/((a(j)-b_1)*(a(j)-b_2))+h*(a(j)+h-b_2)*c(b_1,j)/((b_1-a(j))*(b_1-b_2)) + h*(a(j)+h-b_1)*c(b_2,j)/((b_2-a(j))*(b_2-b_1));
dc_dr = ((c_ah)-c_a)/h;
a(j+1) = a(j) +dt*beta*dc_dr;
for i=2:N_i - 1;
if r(i) > a(j+1);
d = rho - (rho/(i-1)) - (a(j)^2)*(alpha-1)*(a(j+1)-a(j))/(2*(i-1)^2*(dr)^3);
e = 1-2*rho;
f = rho + (rho/(i-1)) + (a(j)^2)*(alpha-1)*(a(j+1)-a(j))/(2*(i-1)^2*(dr)^3);
c(i, j+1) = d*c(i-1,j) + e*c(i,j) + f*c(i+1, j);
elseif r(i) == a(j+1);
c(i,j+1) = c_a;
else c(i,j+1) = c_s;
end
disp(c(i,j));
end
c(1, j+1) = c(2, j+1);
end
It basically calculates concentration near a dissolving sphere but when it gets to disp(c(i,j)) I get caught in loop of displaying numbers that change periodically. Any ideas?

 采纳的回答

Jan
Jan 2012-5-7
And some cleanup:
...
% Vectorization of the "for i=1:N_i;" loop:
r = (0:N_i) * dr;
c = zeros(N_i, N_t - 1); % Pre-allocate!
c(:, 1) = c_inf;
c(r < a_0, 1) = c_s;
...
dr3 = dr ^ 3;
...
% Reduce repeated calculations inside the "for j = 1:N_t -1" loop:
ajp1 = a(j) +dt*beta*dc_dr;
a(j+1) = ajp1;
tmp1 = (a(j)^2) * (alpha-1) * (ajp1-a(j)) / (2 * dr3);
for i = 2:N_i - 1
if r(i) > ajp1
tmp2 = rho / (i-1) + tmp1 / ((i-1)^2);
d = rho - tmp2;
e = 1 - 2 * rho;
f = rho + tmp2;
c(i, j+1) = d*c(i-1,j) + e*c(i,j) + f*c(i+1, j);
elseif r(i) == ajp1
c(i, j+1) = c_a;
else
c(i, j+1) = c_s;
end
% disp(c(i,j));
end

5 个评论

What service!
It is relaxing to improve some Matlab code instead of rererepeating "please format your code" and "please post any details".
Thanks. Cleaned up nicely indeed.
Got an error: Attempted to access a(1); index out of bounds because numel(a)=0.
Error in CleanDiss (line 36)
ajp1 = a(j) +dt*beta*dc_dr;
Ideas?
I fixed the error and get these numbers (which make sense):
0.4011
0.3037
0.3882
0.2886
0.3634
0.2649
0.3293
0.2350
0.2886
0.2014
0.2447
0.1667
0.2006
0.1333
0.1589
0.1028
0.1217
0.0766
0.0900
0.0550
0.0643
0.0381
0.0443
0.0254
0.0294
0.0164
0.0189
0.0101
They generally decrease, which is correct but some of them increase, which shouldn't be true?

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更多回答(1 个)

Richard Brown
Richard Brown 2012-5-7

1 个投票

Your code works fine. If you remove the disp statement (which is causing it to slow down heaps), you'll find that it runs completely in around 10 seconds or so.

2 个评论

Oh, and a hint: Select all the code, then Text->Smart Indent
Cool. Nice trick that I didn't know about.

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